yeast.table: Gene expression data of the yeast cell cycle as table

In Mfuzz: Soft clustering of time series gene expression data

Description

The data serves as an example for the format required for uploading tables with expression data into Mfuzzgui. The first row contains the names of the samples, the second row contains the measured time points. Note that “TIME” has to placed in the first field of the second row.

The first column contains unique identifiers for genes; optionally the second row can contain gene names if “GENE.NAMES” is in the second field in the first row.

An example for an table without optional fields is the dataset yeast.table2.

The exemplary tables can be found in the data sub-folder of the Mfuzzgui package.

References

Cho et al., A genome-wide transcriptional analysis of the mitotic cell cycle, Mol Cell. 1998 Jul;2(1):65-73.

See Also

yeast.table2

Mfuzz documentation built on Nov. 8, 2020, 5:22 p.m.