mfuzzColorBar: Plots a colour bar

In Mfuzz: Soft clustering of time series gene expression data

Description

This function produces a (separate) colour bar for graphs produced by mfuzz.plot

Usage

mfuzzColorBar(col, horizontal=FALSE,...)

Arguments

col	vector of colours used. If missing, the same vector as the default vector for mfuzz.plot is used. If col="fancy", an alternative color palette is used (see mfuzz.plot2.
horizontal	If TRUE, a horizontal colour bar is generated, otherwise a vertical one will be produced.
...	additional parameter passed to maColorBar (see also example in mfuzz.plot2)

Author(s)

Matthias E. Futschik (http://itb.biologie.hu-berlin.de/~futschik)

See Also

maColorBar

Examples

if (interactive()){
 X11(w=1.5,h=5);
 par(mar=c(1,1,1,5))
 mfuzzColorBar()
 mfuzzColorBar(col="fancy",main="Membership value")
}

Example output

Loading required package: Biobase
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:parallel':

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, cbind, colMeans, colSums, colnames, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, lengths, mapply, match, mget, order, paste, pmax, pmax.int,
    pmin, pmin.int, rank, rbind, rowMeans, rowSums, rownames, sapply,
    setdiff, sort, table, tapply, union, unique, unsplit, which,
    which.max, which.min

Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Loading required package: e1071
Warning message:
no DISPLAY variable so Tk is not available 

Mfuzz documentation built on Nov. 8, 2020, 5:22 p.m.