Class "alignments"

Description

This object contains the alignments found by a MotIV analysis.

Objects from the Class

Objects can be created by calls of the form new("alignments", TF, evalue, sequence, match, strand ).

Slots

TF

Object of class "TF"

evalue

The e-value of the alignment.

sequence

The input sequence aligned.

match

The TF sequence wich as been matched.

strand

The strand of the alignment.

Author(s)

Eloi Mercier <emercier@chibi.ubc.ca>

See Also

motiv , matches, transcriptionFactor