Description Details Objects from the Class Slots Author(s) See Also Examples
This object information to be apply as filter.
This class filter
is used to selected motiv
objects according the filter's arguments.
Objects can be created by calls of the form new("filter",name,tfname, top,evalueMax, lengthMax, valid)
.
A name or a list of names.
A transcription factor name or a list of TF names.
An e-value between 0 and 1.
Defined the depth of the filter.
The maximum motif length.
The alignment that should be considered as valid.
Eloi Mercier <emercier@chibi.ubc.ca>
setFilter
, filter
, split
, combine
1 | showClass("filter")
|
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