Man pages for PICS
Probabilistic inference of ChIP-seq

bam2grPre-process bam files
candidate.regionIdentify candidate regions
makeGRangesOutputExport a PICS object to GRanges
PICSEstimation of binding site positions
pics-classPICS class
picsError-classpicsError class
picsFDREstimate the FDR
pics-genericsGenerics associated with pics classes
picsList-classList of PICS objects
plot-picsPlot methods for PICS objects
segChrReadSegmentation of paired-end sequencing data
segmentPICSSegment the genome into candidate regions
segReads-classClasses and functions to segment the genome in candidate...
segReadsGenericPerform genome segmentation depending
segReadsListPE-classClass and methods for list of candidate regions from...
segReadsPE-classClasse and methods for candidate regions from paired-end data
setParaEMList of parameters for the EM algorithm that can be used as...
setParaPriorList of parameters that can be used as an argument of PICS.
summarySegSummarize segmentList objects
PICS documentation built on Nov. 8, 2020, 8:21 p.m.