PharmacoGx: Analysis of Large-Scale Pharmacogenomic Data

Contains a set of functions to perform large-scale analysis of pharmaco-genomic data. These include the PharmacoSet object for storing the results of pharmacogenomic experiments, as well as a number of functions for computing common summaries of drug-dose response and correlating them with the molecular features in a cancer cell-line.

README.md Creating a PharmacoSet Object PharmacoGx: An R Package for Analysis of Large Pharmacogenomic Datasets PharmacoGx: An R Package for Analysis of Large Pharmacogenomic Datasets PharmacoGx: An R Package for Analysis of Large Pharmacogenomic Datasets

Vignettes Man pages API and functions Files

Package details
Author	Petr Smirnov [aut], Zhaleh Safikhani [aut], Christopher Eeles [aut], Mark Freeman [aut], Benjamin Haibe-Kains [aut, cre]
Bioconductor views	Classification GeneExpression Pharmacogenetics Pharmacogenomics Software
Maintainer	Benjamin Haibe-Kains <benjamin.haibe.kains@utoronto.ca>
License	Artistic-2.0
Version	2.2.4
Package repository	View on Bioconductor
Installation	Install the latest version of this package by entering the following in R: `if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("PharmacoGx")`