Description Usage Arguments Value Examples
Combine networks via union, intersection, or difference operations. Lots of optional parameters choose from!
1 2 3 4 5 6 7 8 9 10 11 12 13 |
sources |
List of network names to be merged. |
title |
(optional) Title of the resulting merged network. Default is a concatentation of operation and source network titles. |
operation |
(optional) Type of merge: union (default), intersection or difference. |
nodeKeys |
(optional) An order-dependent list of columns to match nodes across source networks. Default is "name" column for all sources. |
nodeMergeMap |
(optional) A list of column merge records specifying how to merge node table data. Each record should be of the form: c("network1 column", "network2 column", "merged column", "type"), where column names are provided and type is String, Integer, Double or List. |
nodesOnly |
(optional) If TRUE, this will merge the node tables and ignore edge and network table data. Default is FALSE. |
edgeKeys |
(optional) An order-dependent list of columns to match edges across source networks. Default is "name" column for all sources. |
edgeMergeMap |
(optional) A list of column merge records specifying how to merge edge table data. Each record should be of the form: c("network1 column", "network2 column", "merged column", "type"), where column names are provided and type is String, Integer, Double or List. |
networkMergeMap |
(optional) A list of column merge records specifying how to merge network table data. Each record should be of the form: c("network1 column", "network2 column", "merged column", "type"), where column names are provided and type is String, Integer, Double or List. |
inNetworkMerge |
(optional) If TRUE (default), nodes and edges with matching attributes in the same network will be merged. |
base.url |
(optional) Ignore unless you need to specify a custom domain, port or version to connect to the CyREST API. Default is http://localhost:1234 and the latest version of the CyREST API supported by this version of RCy3. |
SUID of resulting merged network
1 2 3 | mergeNetworks(c("Network 1", "Network 2"), "Merged Network")
mergeNetworks(c("my network","string network"), "Merged Network",
nodeKeys=c("HGNC","query term"))
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