setNodeColorMapping: Set Node Color Mapping

Description Usage Arguments Value Examples

Description

Map table column values to colors to set the node fill color.

Usage

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setNodeColorMapping(
  table.column,
  table.column.values = NULL,
  colors = NULL,
  mapping.type = "c",
  default.color = NULL,
  style.name = NULL,
  network = NULL,
  base.url = .defaultBaseUrl
)

Arguments

table.column

Name of Cytoscape table column to map values from

table.column.values

List of values from Cytoscape table to be used in mapping

colors

List of hex colors to map to table.column.values

mapping.type

(char) continuous, discrete or passthrough (c,d,p); default is continuous

default.color

Hex color to set as default

style.name

Name of style; default is "default" style

network

(optional) Name or SUID of the network. Default is the "current" network active in Cytoscape.

base.url

(optional) Ignore unless you need to specify a custom domain, port or version to connect to the CyREST API. Default is http://localhost:1234 and the latest version of the CyREST API supported by this version of RCy3.

Value

None

Examples

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setNodeColorMapping('score', c(-5,0,5), c('#5577FF','#FFFFFF','#FF7755'))

RCy3 documentation built on Nov. 21, 2020, 2 a.m.