setNodeColorMapping: Set Node Color Mapping

In RCy3: Functions to Access and Control Cytoscape

Description

Map table column values to colors to set the node fill color.

Usage

setNodeColorMapping(
  table.column,
  table.column.values = NULL,
  colors = NULL,
  mapping.type = "c",
  default.color = NULL,
  style.name = NULL,
  network = NULL,
  base.url = .defaultBaseUrl
)

Arguments

table.column	Name of Cytoscape table column to map values from
table.column.values	List of values from Cytoscape table to be used in mapping
colors	List of hex colors to map to table.column.values
mapping.type	(char) continuous, discrete or passthrough (c,d,p); default is continuous
default.color	Hex color to set as default
style.name	Name of style; default is "default" style
network	(optional) Name or SUID of the network. Default is the "current" network active in Cytoscape.
base.url	(optional) Ignore unless you need to specify a custom domain, port or version to connect to the CyREST API. Default is http://localhost:1234 and the latest version of the CyREST API supported by this version of RCy3.

Value

None

Examples

setNodeColorMapping('score', c(-5,0,5), c('#5577FF','#FFFFFF','#FF7755'))

RCy3 documentation built on Nov. 21, 2020, 2 a.m.