getGraphFromCyWindow: getGraphFromCyWindow
In RCytoscape: Display and manipulate graphs in Cytoscape
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Returns the Cytoscape network as a bioconductor graph
Usage
1
getGraphFromCyWindow(obj, window.title)
Arguments
obj
a CytoscapeConnectionClass object.
window.title
a string object.
Value
A bioconductor graph object.
Author(s)
Paul Shannon
Examples
1
2
3
4
5
6
cw <- CytoscapeWindow ('getGraphFromCyWindow.test', graph=makeSimpleGraph())
displayGraph (cw)
layoutNetwork(cw)
redraw (cw)
g.cy <- getGraphFromCyWindow (cw, 'getGraphFromCyWindow.test')
print (g.cy) # 3 nodes, 3 edges
RCytoscape documentation built on Nov. 17, 2017, 10:52 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
Returns the Cytoscape network as a bioconductor graph
Usage
1 | getGraphFromCyWindow(obj, window.title)
|
Arguments
obj |
a |
window.title |
a |
Value
A bioconductor graph object.
Author(s)
Paul Shannon
Examples
1 2 3 4 5 6 | cw <- CytoscapeWindow ('getGraphFromCyWindow.test', graph=makeSimpleGraph())
displayGraph (cw)
layoutNetwork(cw)
redraw (cw)
g.cy <- getGraphFromCyWindow (cw, 'getGraphFromCyWindow.test')
print (g.cy) # 3 nodes, 3 edges
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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