Files in RNAinteract
Estimate Pairwise Interactions from multidimensional features
NAMESPACE
DESCRIPTION
build/vignette.rds
data/sgi.rda
R/grid.doublePerturbation.R
R/mainEffects.R
R/reportAnnotation.R
R/subsetting.R
R/reportHeatmap.R
R/report.R
R/transformation.R
R/reportStatistics.R
R/plotHeatmap.R
R/grid.sgiHeatmap.R
R/reportNetworks.R
R/createRNAinteract.R
R/reportMainEffects.R
R/createCellHTS.R
R/reportPCA.R
R/reportGeneLists.R
R/dataAccess.R
R/reportScreenSGI.R
R/plotDoublePerturbation.R
R/normalization.R
R/reportDoublePerturbation.R
R/AllClass.R
R/computePvalue.R
vignettes/RNAinteract.Rnw
man/sgi.Rd
man/getReplicateData.Rd
man/createRNAinteractFromFiles.Rd
man/bindsamples.Rd
man/summarizeSamples.Rd
man/plotHeatmap.Rd
man/RNAinteract-class.Rd
man/embedPCA.Rd
man/getMain.Rd
man/RNAinteract-package.Rd
man/normalizeMainEffectTemplate.Rd
man/createRNAinteract.Rd
man/getSampleNames.Rd
man/startReport.Rd
man/computePI.Rd
man/getScale.Rd
man/sgisubsetQueryDesign.Rd
man/plotDoublePerturbation.Rd
man/normalizePlateEffect.Rd
man/estimateMainEffect.Rd
man/getData.Rd
man/reportAnnotation.Rd
man/createCellHTSFromFiles.Rd
man/computePValues.Rd
man/normalizeMainEffectQuery.Rd
man/grid.doublePerturbation.Rd
man/sgisubset.Rd
man/grid.sgiHeatmap.Rd
man/swaptree.Rd
inst/CITATION
inst/doc/RNAinteract.pdf
inst/doc/RNAinteract.R
inst/doc/RNAinteract.Rnw
inst/RNAinteractExample/Platelist.txt
inst/RNAinteractExample/networks.txt
inst/RNAinteractExample/DataRNAinteractExample_2.txt
inst/RNAinteractExample/Reagents.txt
inst/RNAinteractExample/Targets.txt
inst/RNAinteractExample/DataRNAinteractExample_1.txt
inst/RNAinteractExample/QueryDesign.txt
inst/RNAinteractExample/TemplateDesign.txt
inst/makeExample/makeExample.Rnw
