API for ROntoTools
R Onto-Tools suite
| Global functions | |
|---|---|
| KEGGpathway2Graph | Man page |
| Summary,pDisRes-method | Man page |
| Summary,peRes-method | Man page |
| addNames | Source code |
| alpha1MR | Man page Source code |
| alphaMLG | Man page Source code |
| compute.B | Source code |
| compute.B_pDis | Source code |
| compute.bootPV | Source code |
| compute.fisher | Man page Source code |
| compute.inverse | Source code |
| compute.normalInv | Man page Source code |
| compute.pAcc | Source code |
| compute.pORA | Source code Source code |
| compute.pPert | Source code |
| compute.ppDis | Source code |
| get.totalAcc | Source code |
| get.totalAccNorm | Source code |
| get.totalPert | Source code |
| get.totalPertNorm | Source code |
| get.totalpDis | Source code |
| get.totalpDisNorm | Source code |
| graph2ftM | Source code |
| keggPathwayGraphs | Man page Source code |
| keggPathwayNames | Man page Source code |
| loadKEGGpathwayDataREST | Source code |
| nodeWeights | Man page |
| nodeWeights,graph,character-method | Man page |
| nodeWeights,graph,missing-method | Man page |
| nodeWeights,graph,numeric-method | Man page |
| pDis | Man page Source code |
| pDis.boot | Source code |
| pDis.helper | Source code |
| pDisPathway-class | Man page |
| pDisRes-class | Man page |
| pe | Man page Source code |
| pe.boot | Source code |
| peEdgeRenderInfo | Man page Source code |
| peNodeRenderInfo | Man page Source code |
| pePathway-class | Man page |
| peRes-class | Man page |
| pf.helper | Source code |
| plot,pePathway,character-method | Man page |
| plot,pePathway,missing-method | Man page |
| plot,peRes,character-method | Man page |
| plot,peRes,missing-method | Man page |
| setEdgeWeights | Man page Source code |
| setNodeWeights | Man page Source code |
| subGraphByNodeType | Man page |
| summary.pDisRes | Man page Source code |
| summary.peRes | Man page Source code |
