extractProtCTriad: Conjoint Triad Descriptor

Description Usage Arguments Details Value Author(s) References Examples

View source: R/410-extractProtCTriad.R

Description

Conjoint Triad Descriptor

Usage

1

Arguments

x

A character vector, as the input protein sequence.

Details

This function calculates the Conjoint Triad descriptor (Dim: 343).

Value

A length 343 named vector

Author(s)

Nan Xiao <https://nanx.me>

References

J.W. Shen, J. Zhang, X.M. Luo, W.L. Zhu, K.Q. Yu, K.X. Chen, Y.X. Li, H.L. Jiang. Predicting Protein-protein Interactions Based Only on Sequences Information. Proceedings of the National Academy of Sciences. 007, 104, 4337–4341.

Examples

1
2
x = readFASTA(system.file('protseq/P00750.fasta', package = 'Rcpi'))[[1]]
extractProtCTriad(x)

Rcpi documentation built on Sept. 9, 2017, 2:01 a.m.