write.investigation.file: Writes the Investigation File of an ISA-Tab dataset

In Risa: Converting experimental metadata from ISA-tab into Bioconductor data structures

Description

write.investigation.file reads a ISA-tab file.

Usage

write.investigation.file(isa, path = getwd())

Arguments

isa	the ISA-Tab object (as retrieved by the readISAtab function)
path	the output path in which the study file is going to be written, by default is the working directory

Author(s)

Alejandra Gonzalez-Beltran / Maintainer: Alejandra Gonzalez-Beltran, ISA Team <[e-mail]>

See Also

write.ISAtab, write.study.file, write.assay.file, readISAtab

Examples

    ### Example of writing the study file of faahKO ISA-Tab dataset into the temp director
    faahkoISA <- readISAtab(find.package("faahKO"))
    temp = tempdir()
    write.investigation.file(faahkoISA, temp)

Risa documentation built on Nov. 8, 2020, 5:35 p.m.