get_graph: get_graph

Description Usage Value Author(s) References See Also

Description

Return an igraph object with the STRING network (for information about iGraph visit http://igraph.sourceforge.net)

Usage

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## S4 method for signature 'STRINGdb'
get_graph()

Value

igraph object with the STRING network

Author(s)

Andrea Franceschini

References

Csardi G, Nepusz T: The igraph software package for complex network research, InterJournal, Complex Systems 1695. 2006. http://igraph.sf.net

See Also

In order to simplify the most common tasks, we do also provide convenient functions that wrap some iGraph functions. get_interactions(string_ids) # returns the interactions in between the input proteins get_neighbors(string_ids) # Get the neighborhoods of a protein (or of a vector of proteins) that is given in input. get_subnetwork(string_ids) # returns a subgraph from the given input proteins


STRINGdb documentation built on March 10, 2021, 2 a.m.