get_png: get_png

In STRINGdb: STRINGdb (Search Tool for the Retrieval of Interacting proteins database)

Description

Returns a png image of a STRING protein network with the given identifiers.

Usage

## S4 method for signature 'STRINGdb'
get_png(string_ids, required_score=NULL, network_flavor="evidence", file=NULL, payload_id=NULL)

Arguments

string_ids	a vector of STRING identifiers.
required_score	minimum STRING combined score of the interactions (if left NULL we get the combined score of the object, which is 400 by default).
network_flavor	specify the flavor of the network ("evidence", "confidence" or "actions". default "evidence").
file	file where to save the image
payload_id	identifier of the payload

Value

Returns a png image of a STRING protein network with the given identifiers.

Author(s)

Andrea Franceschini

STRINGdb documentation built on March 10, 2021, 2 a.m.