load: load
In STRINGdb: STRINGdb (Search Tool for the Retrieval of Interacting proteins database)
Description
Usage
Value
Author(s)
Description
Downloads and returns the STRING network (the network is set also in the graph variable of the STRING_db object).
It makes use of the variables:
"backgroundV" vector containing STRING identifiers to be used as background
(i.e. the STRING network loaded will contain only the proteins that are present also in this vector)
"score_threshold" STRING combined score threshold (the network loaded contains only interactions having a combined score greater than this threshold)
Usage
1
2
## S4 method for signature 'STRINGdb'
load()
Value
STRING network (i.e. an iGraph object. For info look to http://igraph.sourceforge.net)
Author(s)
Andrea Franceschini
STRINGdb documentation built on March 10, 2021, 2 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Value Author(s)
Description
Downloads and returns the STRING network (the network is set also in the graph variable of the STRING_db object).
It makes use of the variables: "backgroundV" vector containing STRING identifiers to be used as background (i.e. the STRING network loaded will contain only the proteins that are present also in this vector) "score_threshold" STRING combined score threshold (the network loaded contains only interactions having a combined score greater than this threshold)
Usage
1 2 | ## S4 method for signature 'STRINGdb'
load()
|
Value
STRING network (i.e. an iGraph object. For info look to http://igraph.sourceforge.net)
Author(s)
Andrea Franceschini
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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