AddTsne | Add tSNE to your results. |
bz.gmcsf.final | Bodenmiller-Zunder GM-CSF post-SCONE final data |
bz.gmcsf.final.norm.scale | Bodenmiller-Zunder GM-CSF post-SCONE final data, that's been... |
exist | Random musing |
FcsToTibble | Takes a file as input and returns a data frame of cells by... |
Fnn | Compute knn using the fnn algorithm |
funct.markers | Functional markers from the Wanderlust dataset. |
GetKnnDe | Get the KNN density estimaion |
GetMarkerNames | Takes in an example file as input and returns all marker... |
Impute | Imputes values for all markers (used as input) for each cell |
ImputeTesting | Impute testing |
input.markers | Input markers for the Wanderlust dataset |
LogTransformQ | Log transform the q values |
MakeHist | make.hist |
MakeKnnList | Make list of cells by features for each KNN member |
markers | Markers for the Wanderlust dataset |
MeaningOfLife | Meaning of life |
MultipleDonorStatistics | Runs a t test on the medians or means of multiple donors for... |
ParseMarkers | Parse markers contained in a Sconify-directed marker file |
PostProcessing | Post-processing for scone analysks. |
ProcessMultipleFiles | Converts multiple files into a concatenated data frame |
QCorrectionThresholding | Corrects all p values for multiple hypotheses, sets threshold... |
QuantNormalize | Performs quantile normalization on the data frame (patient)... |
QuantNormalizeElements | Takes a list of tibbles as input, and performs per-column... |
RunStatistics | Performs a series of statistical tests on the batch of cells... |
SconeValues | Master function for per-knn statistics functionality,... |
SplitFile | Runs "process.multiple.files" on a single file, splits it... |
StringToNumbers | Transform strings to numbers. |
SubsampleAndTsne | Subsample data and run tSNE |
TsneVis | Plot a tSNE map colored by a marker of interest |
wand.combined | Wanderlust data combined basal and IL7 cells |
wand.final | Post-scone output of the "combiend" Wanderlust data. |
wand.ideal.k | A named vector to help the user determine the ideal k for the... |
wand.il7 | Wanderlust IL7 data |
wand.scone | Wanderlust scone output |
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.