API for SpeCond
Condition specific detection from expression data
| Global functions | |
|---|---|
| SpeCond | Man page Source code |
| callMclustInStep2 | Source code |
| changeColorClassification | Source code |
| createOutdir | Source code |
| createParameterMatrix | Man page Source code |
| createSingleGeneHtmlPage | Source code |
| detectSpecificFromPV | Source code |
| expSetSpeCondExample | Man page |
| expressionSpeCondExample | Man page |
| fitNoPriorWithExclusion | Man page Source code |
| fitPrior | Man page Source code |
| getDefaultParameter | Man page Source code |
| getDifferenceMedian | Source code |
| getExpressionpatternLegend | Source code |
| getFullHtmlSpeCondResult | Man page Source code |
| getGeneHtmlPage | Man page Source code |
| getHeatmap | Source code |
| getIdenticRow | Source code |
| getLambdaBIC | Source code |
| getListSelectiveResult | Source code |
| getLoglikelihoodFromBIC | Source code |
| getMatrixFromExpressionSet | Man page Source code |
| getMinLoglikelihoodNull | Source code |
| getNullLoglikelihoodRsdMd | Source code |
| getPValueMean | Source code |
| getProfile | Man page Source code |
| getProfileHeatmap | Source code |
| getRsdNull | Source code |
| getScaleMAD | Source code |
| getSelectiveResultTable | Source code |
| getSpecific | Source code |
| getSpecificOutliersStep1 | Man page Source code |
| getSpecificResult | Man page Source code |
| get_normal_separated | Source code |
| mclust_step2 | Source code |
| plotNormalMixture | Source code |
| printHead | Source code |
| printHeadList | Source code |
| printHeadListGene | Source code |
| printHeadMatrix | Source code |
| printHeadVector | Source code |
| show.sp_list | Source code |
| simulatedSpeCondData | Man page |
| writeGeneResult | Man page Source code |
| writeSpeCondResult | Man page Source code |
| writeUniqueProfileSpecificResult | Man page Source code |
