simulatedSpeCondData: An example of simulated expression matrix used in the SpeCond...

In SpeCond: Condition specific detection from expression data

Description

simulatedSpeCondData is a expression value matrix used as an example for the SpeCond package. The expression values were randomly generated from three different normal distributions.

Usage

data(simulatedSpeCondData)

Format

A matrix of 600 rows and 30 columns

Details

The default expression values for each probeset is randomly generated from a normal distribution of mean=7 and sd=0.6. The probesets 1 to 100 have specific expression values for the conditions 10, 20 and 30 coming from a normal distribution of mean=11, sd=0.5. The probesets 200 to 300 have specific expression values for the conditions 9, 18 and 27 coming from a normal distribution of mean=13, sd=0.4. This data set is used to show the ipmportance and the effect of the paramters in the SpeCond detection. See the SpCond vignette for more detailsy

Examples

data(simulatedSpeCondData)

SpeCond documentation built on Nov. 8, 2020, 4:57 p.m.