Man pages for SpeCond
Condition specific detection from expression data
| createParameterMatrix | Create or Modify the SpeCond argument parameters |
| expressionSpeCondExample | The expression matrix example used in the SpeCond package |
| expSetSpeCondExample | An ExpressionSet example object used in the SpeCond package |
| fitNoPriorWithExclusion | Fit the expression values profile with a mixture of normal... |
| fitPrior | Fit the expression value profiles with a mixture of normal... |
| getDefaultParameter | Get the default parameter to use SpeCond function |
| getFullHtmlSpeCondResult | Visualisation function of the SpeCond analysis results |
| getGeneHtmlPage | Visualise for each gene the condition-specific detection... |
| getMatrixFromExpressionSet | Obtain the expression matrix from an ExpressionSet object |
| getProfile | Create the condition-specific profile of specific matrix... |
| getSpecificOutliersStep1 | Detect the condition-specific as outliers in for the first... |
| getSpecificResult | Detect the condition-specific genes for the second step on... |
| simulatedSpeCondData | An example of simulated expression matrix used in the SpeCond... |
| SpeCond | The condition-specific detection function |
| writeGeneResult | Write a condition-specific analysis result text file |
| writeSpeCondResult | Write in text files the main result of the SpeCond function |
| writeUniqueProfileSpecificResult | Write the specific profiles from the SpeCond analysis |
