SpidermiR
SpidermiR: An R/Bioconductor package for integrative network analysis with miRNA data

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SpidermiR: SpidermiR: An R/Bioconductor package for integrative network analysis with miRNA data
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Man pages for SpidermiR
SpidermiR: An R/Bioconductor package for integrative network analysis with miRNA data

SpidermiRanalyze_Community_detectionFind community detection
SpidermiRanalyze_Community_detection_biCommunity detection from biomarkers of interest
SpidermiRanalyze_Community_detection_netFind the network of community detection and direct biormarker
SpidermiRanalyze_degree_centralityRanking degree centrality genes
SpidermiRanalyze_direct_netSearching by biomarkers of interest with direct interaction
SpidermiRanalyze_direct_subnetworkSearching by biomarkers of interest with direct interaction...
SpidermiRanalyze_subnetwork_neighSearching by biomarkers of interest and all the edges among...
SpidermiRdownload_drug_geneDownload drug-gene interactions in DGIdb
SpidermiRdownload_miRNAextra_cirDownload miRNA validated database
SpidermiRdownload_miRNApredictionDownload human miRNA predicted database
SpidermiRdownload_miRNAprediction_mmuDownload mmu miRNA predicted database
SpidermiRdownload_miRNAvalidateDownload miRNA validated database
SpidermiRdownload_netDownload the network from GeneMania.
SpidermiRdownload_pharmacomirDownload drug-miRNA interactions with fisher test
SpidermiRprepare_NETPrepare matrix of gene network from Genamania with Ensembl...
SpidermiRquery_diseaseVisualize disease categories
SpidermiRquery_networks_typeNetwork categories
SpidermiRquery_speciesSearching by network species
SpidermiRquery_spec_networksSearching by network categories
SpidermiRvisualize_3Dbarplotplots the 3D barplot
SpidermiRvisualize_adj_matrixplots the adjacency matrix of the network
SpidermiRvisualize_BIVisualize results obtained by SpidermiR analysis starting...
SpidermiRvisualize_degree_distplots the degree distribution of the network
SpidermiRvisualize_directionVisualize results obtained by SpidermiR analysis with the...
SpidermiRvisualize_mirnanetVisualize results obtained by SpidermiR analysis
SpidermiRvisualize_plot_targetVisualize results obtained by SpidermiRanalyze_mirna_network
SpidermiR documentation built on Nov. 8, 2020, 8:25 p.m.

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