SpidermiRanalyze_Community_detection_bi: Community detection from biomarkers of interest
In SpidermiR: SpidermiR: An R/Bioconductor package for integrative network analysis with miRNA data
Description
Usage
Arguments
Value
Examples
View source: R/SpidermiRanalyze.R
Description
SpidermiRanalyze_Community_detection_bi find the cluster with biomarkers of interest
Usage
1
Arguments
data
SpidermiRanalyze_Community_detection output
BI
a set of biomarkers of interest
Value
a list with the cluster for each biomarkers of interest
Examples
1
2
3
4
miRNA_cN <-data.frame(gA=c('hsa-let-7a','hsa-miR-300'),gB=c('FOXM1','KPNA4'),stringsAsFactors=FALSE)
comm<- SpidermiRanalyze_Community_detection(data=miRNA_cN,type="FC")
biomark_of_interest<-c("hsa-let-7a","CDK","FOXO1","hsa-miR-27a")
mol<-SpidermiRanalyze_Community_detection_bi(data=comm,BI=biomark_of_interest)
SpidermiR documentation built on Nov. 8, 2020, 8:25 p.m.
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Description Usage Arguments Value Examples
View source: R/SpidermiRanalyze.R
Description
SpidermiRanalyze_Community_detection_bi find the cluster with biomarkers of interest
Usage
1 |
Arguments
data |
SpidermiRanalyze_Community_detection output |
BI |
a set of biomarkers of interest |
Value
a list with the cluster for each biomarkers of interest
Examples
1 2 3 4 | miRNA_cN <-data.frame(gA=c('hsa-let-7a','hsa-miR-300'),gB=c('FOXM1','KPNA4'),stringsAsFactors=FALSE)
comm<- SpidermiRanalyze_Community_detection(data=miRNA_cN,type="FC")
biomark_of_interest<-c("hsa-let-7a","CDK","FOXO1","hsa-miR-27a")
mol<-SpidermiRanalyze_Community_detection_bi(data=comm,BI=biomark_of_interest)
|
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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