SpidermiRquery_spec_networks: Searching by network categories
In SpidermiR: SpidermiR: An R/Bioconductor package for integrative network analysis with miRNA data
Description
Usage
Arguments
Value
Examples
View source: R/SpidermiRquery.R
Description
The user can visualize the database or reference where the information came from
Usage
1
SpidermiRquery_spec_networks(organismID, network)
Arguments
organismID
describes index of a specific specie obtained by SpidermiRquery_species output
network
The network type the user is interested in.
Example:
COexp Co-expression
PHint Physical_interactions
COloc Co-localization
GENint Genetic_interactions
PATH Pathway
SHpd Shared_protein_domains
pred Predicted
Value
a list of the database or reference where the information came from.
Examples
1
2
3
org<-SpidermiRquery_species(species)
net_shar_prot<-SpidermiRquery_spec_networks(organismID = org[9,],
network = "SHpd")
SpidermiR documentation built on Nov. 8, 2020, 8:25 p.m.
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Description Usage Arguments Value Examples
View source: R/SpidermiRquery.R
Description
The user can visualize the database or reference where the information came from
Usage
1 | SpidermiRquery_spec_networks(organismID, network)
|
Arguments
organismID |
describes index of a specific specie obtained by SpidermiRquery_species output | |||||||||||||||
network |
The network type the user is interested in. Example:
|
Value
a list of the database or reference where the information came from.
Examples
1 2 3 | org<-SpidermiRquery_species(species)
net_shar_prot<-SpidermiRquery_spec_networks(organismID = org[9,],
network = "SHpd")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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