as.kfold.prederr: as.kfold.prederr

In TRONCO: TRONCO, an R package for TRanslational ONCOlogy

Description

Returns a dataframe with all the prediction error score in a TRONCO model. It is possible to specify a subset of events or models if multiple reconstruction have been performed.

Usage

as.kfold.prederr(
  x,
  events = as.events(x),
  models = names(x$model),
  values = FALSE,
  table = FALSE
)

Arguments

x	A TRONCO model.
events	A subset of events as of as.events(x), all by default.
models	A subset of reconstructed models, all by default.
values	If you want to see also the values
table	Keep the original table (defaul false)

Value

All the bootstrap scores in a TRONCO model

Examples

data(test_model_kfold)
as.kfold.prederr(test_model_kfold)
as.kfold.prederr(test_model_kfold, models='capri_aic')

TRONCO documentation built on Nov. 8, 2020, 5:51 p.m.