cutoffs_pcawg: Opt. cutoffs, PCAWG SNV signatures, including artifacts

In YAPSA: Yet Another Package for Signature Analysis

Description

cutoffPCAWG_SBS_WGSWES_artifPid_df: Optimal cutoffs for PCAWG_SP_SBS_sigs_Artif_df, i.e. initially published signatures,including artifact signatures, trained in a single-sample resolution.

cutoffPCAWG_SBS_WGSWES_realPid_df: Optimal cutoffs for PCAWG_SP_SBS_sigs_Real_df, i.e. initially published signatures, only validated signatures, trained in a single-sample resolution.

cutoffPCAWG_ID_WGS_Pid_df: Optimal cutoffs for PCAWG_SP_ID_sigs_df, i.e. initially published signatures, signatures, trained in a single-sample resolution.

Usage

data(cutoffs_pcawg)

Author(s)

Lea Jopp-Saile [e-mail]

YAPSA documentation built on Nov. 8, 2020, 4:59 p.m.