exome_mutCatRaw_df: Example mutational catalog for the exome vignette
In YAPSA: Yet Another Package for Signature Analysis
Description
Usage
Value
References
Examples
Description
exome_mutCatRaw_df: A data frame in the format of a SNV mutation
catalog. The mutational catalog contains SNV variants from a cohort of
small-cell lung cancer published by Rudin et al. (Nature Genetics 2012)
which was later used in the de novo discovery analysis of mutational
signatures in human cancer by Alexandrov et al. (Nature 2013).
Usage
1
data(smallCellLungCancerMutCat_NatureGenetics2012)
Value
A data fame in the layout of a SNV mutational catalog
References
https://www.nature.com/articles/ng.2405
Examples
1
2
3
data(smallCellLungCancerMutCat_NatureGenetics2012)
head(exome_mutCatRaw_df)
dim(exome_mutCatRaw_df)
YAPSA documentation built on Nov. 8, 2020, 4:59 p.m.
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Description Usage Value References Examples
Description
exome_mutCatRaw_df: A data frame in the format of a SNV mutation
catalog. The mutational catalog contains SNV variants from a cohort of
small-cell lung cancer published by Rudin et al. (Nature Genetics 2012)
which was later used in the de novo discovery analysis of mutational
signatures in human cancer by Alexandrov et al. (Nature 2013).
Usage
1 | data(smallCellLungCancerMutCat_NatureGenetics2012)
|
Value
A data fame in the layout of a SNV mutational catalog
References
https://www.nature.com/articles/ng.2405
Examples
1 2 3 | data(smallCellLungCancerMutCat_NatureGenetics2012)
head(exome_mutCatRaw_df)
dim(exome_mutCatRaw_df)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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