find_affected_PIDs: Find samples affected
In YAPSA: Yet Another Package for Signature Analysis
Description
Usage
Arguments
Value
Examples
View source: R/basic_functions.R
Description
Find samples affected by SNVs in a certain pathway
Usage
1
find_affected_PIDs(in_gene_list, in_gene_vector, in_PID_vector)
Arguments
in_gene_list
List of genes in the pathway of interest.
in_gene_vector
Character vector for genes annotated to SNVs as in
vcf_like_df.
in_PID_vector
Character vector for sample names annotated to SNVs as
in vcf_like_df.
Value
A character vector of the names of the affected samples
Examples
1
YAPSA documentation built on Nov. 8, 2020, 4:59 p.m.
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Description Usage Arguments Value Examples
View source: R/basic_functions.R
Description
Find samples affected by SNVs in a certain pathway
Usage
1 | find_affected_PIDs(in_gene_list, in_gene_vector, in_PID_vector)
|
Arguments
in_gene_list |
List of genes in the pathway of interest. |
in_gene_vector |
Character vector for genes annotated to SNVs as in
|
in_PID_vector |
Character vector for sample names annotated to SNVs as
in |
Value
A character vector of the names of the affected samples
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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