dot-abundanceAnalysis: Conducts abundance analysis

Description Usage Arguments Value

Description

Conducts abundance analysis

Usage

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.abundanceAnalysis(abundanceDirectories, abunOut, sampleNames,
  combinedNames, mashedNames, skipDgene = FALSE, .save = TRUE)

Arguments

abundanceDirectories

list type. List of sample directories

abunOut

string type. Output directory

sampleNames

vector type. 1-1 correspondence with abundanceDirectories

combinedNames

string type. Title "combined" sample names

mashedNames

string type. File "mashed" names - avoid special chars

skipDgene

logical type. Skip D gene plots?

.save

logical type. Save ggplot as Rdata

Value

None


abseqR documentation built on Nov. 8, 2020, 8:28 p.m.