dot-abundanceAnalysis: Conducts abundance analysis
In abseqR: Reporting and data analysis functionalities for Rep-Seq datasets of antibody libraries
Description
Usage
Arguments
Value
Description
Conducts abundance analysis
Usage
1
2
.abundanceAnalysis(abundanceDirectories, abunOut, sampleNames,
combinedNames, mashedNames, skipDgene = FALSE, .save = TRUE)
Arguments
abundanceDirectories
list type. List of sample directories
abunOut
string type. Output directory
sampleNames
vector type. 1-1 correspondence with abundanceDirectories
combinedNames
string type. Title "combined" sample names
mashedNames
string type. File "mashed" names - avoid special chars
skipDgene
logical type. Skip D gene plots?
.save
logical type. Save ggplot as Rdata
Value
None
abseqR documentation built on Nov. 8, 2020, 8:28 p.m.
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Description Usage Arguments Value
Description
Conducts abundance analysis
Usage
1 2 | .abundanceAnalysis(abundanceDirectories, abunOut, sampleNames,
combinedNames, mashedNames, skipDgene = FALSE, .save = TRUE)
|
Arguments
abundanceDirectories |
list type. List of sample directories |
abunOut |
string type. Output directory |
sampleNames |
vector type. 1-1 correspondence with abundanceDirectories |
combinedNames |
string type. Title "combined" sample names |
mashedNames |
string type. File "mashed" names - avoid special chars |
skipDgene |
logical type. Skip D gene plots? |
.save |
logical type. Save ggplot as Rdata |
Value
None
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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