dot-generateDelayedReport: Generates report for all samples in 'compare'

In abseqR: Reporting and data analysis functionalities for Rep-Seq datasets of antibody libraries

Description

This function is needed because we are delaying the generation of reports until after all threads/processes have joined. There's currently an issue with rmarkdown::render() in parallel execution, see: https://github.com/rstudio/rmarkdown/issues/499

Usage

.generateDelayedReport(root, compare, interactivePlot)

Arguments

root	string, project root directory.
compare	vector of strings, each string is a comparison defined by the user (assumes that this value has been checked).
interactivePlot	logical, whether or not to plot interactive plotly plots.

Value

a named list of samples, each an AbSeqRep object found in "root"

abseqR documentation built on Nov. 8, 2020, 8:28 p.m.