affycomp: Graphics Toolbox for Assessment of Affymetrix Expression Measures

The package contains functions that can be used to compare expression measures for Affymetrix Oligonucleotide Arrays.

AuthorRafael A. Irizarry <rafa@jhu.edu> and Zhijin Wu <zwu@stat.brown.edu> with contributions from Simon Cawley <simon_cawley@affymetrix.com>
Date of publicationNone
MaintainerRafael A. Irizarry <rafa@jhu.edu>
LicenseGPL (>= 2)
Version1.50.0

View on Bioconductor

Files in this package

affycomp/DESCRIPTION
affycomp/NAMESPACE
affycomp/R
affycomp/R/assess.R affycomp/R/compfigs.R affycomp/R/figures.R affycomp/R/newfuncs.R affycomp/R/readin.R affycomp/R/table.R affycomp/R/zzz.R
affycomp/build
affycomp/build/vignette.rds
affycomp/data
affycomp/data/datalist
affycomp/data/dilution.phenodata.rda
affycomp/data/hgu133a.spikein.phenodata.rda
affycomp/data/hgu133a.spikein.xhyb.rda
affycomp/data/mas5.assessment.rda
affycomp/data/spikein.phenodata.rda
affycomp/inst
affycomp/inst/Rnw
affycomp/inst/Rnw/Fig5cde.133.Rnw
affycomp/inst/Rnw/Fig5cde.Rnw
affycomp/inst/Rnw/comparison.Rnw
affycomp/inst/Rnw/complete-assessment.Rnw
affycomp/inst/Rnw/dilution-assessment.Rnw
affycomp/inst/Rnw/simple.Rnw
affycomp/inst/Rnw/spike-in-133-assessment.Rnw
affycomp/inst/Rnw/spike-in-assessment.Rnw
affycomp/inst/doc
affycomp/inst/doc/affycomp.R
affycomp/inst/doc/affycomp.Rnw
affycomp/inst/doc/affycomp.pdf
affycomp/man
affycomp/man/SD.Rd affycomp/man/affycomp.compfigs.auxiliary.Rd affycomp/man/affycomp.figures.auxiliary.Rd affycomp/man/affycomp.table.Rd affycomp/man/affycompPlot.Rd affycomp/man/assessAll.Rd affycomp/man/assessDilution.Rd affycomp/man/assessSD.Rd affycomp/man/assessSpikeIn.Rd affycomp/man/assessSpikeIn2.Rd affycomp/man/dilution.phenodata.Rd affycomp/man/exprset.log.Rd affycomp/man/hgu133a.spikein.phenodata.Rd affycomp/man/mas5.assessment.Rd affycomp/man/readin.Rd affycomp/man/remove.hgu133a.xhyb.Rd affycomp/man/spikein.phenodata.Rd affycomp/man/xhyb.Rd
affycomp/vignettes
affycomp/vignettes/affycomp.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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