slideQuality: Quality Control statistics for general hybridization
In arrayQuality: Assessing array quality on spotted arrays

Description Usage Arguments Value Author(s) See Also Examples

This component uses data extracted from GenePix file to provide quality control statistics.

1	slideQuality(gprData = NULL, controlMatrix = controlCode, controlId = c("ID", "Name"), DEBUG = FALSE,...)

`gprData`	A list of vector, results from `readGPR`, containing information extracted from the gpr file.
`controlMatrix`	A matrix defining control status information.
`controlId`	Character string. Name of the column of the gpr file used to define controls.
`DEBUG`	If 'TRUE', debug statements are printed.
`...`	additional arguments

A matrix of numbers.

Agnes Paquet

gpQuality, globalQuality, readGPR

datadir <- system.file("gprQCData", package="arrayQuality")
if (interactive())
{
gprdata <- readGPR(fnames="9Mm137.gpr", path=datadir)
results <- slideQuality(gprdata)
}