API for basecallQC
Working with Illumina Basecalling and Demultiplexing input and output files

Global functions
BCL2FastQparams Man page Man page
BCL2FastQparams-BCL2FastQparams Man page Man page
BCL2FastQparams-class Man page
baseCallMetrics Man page
basecallQC Man page Man page
basecallQC-basecallQC Man page
basecallQC-class Man page
createBCLcommand Man page
createBasemasks Man page
demultiplexMetrics Man page
demuxBarplot Man page
demuxBarplot,baseCallQC-method Man page
demuxBarplot,basecallQC-method Man page
demuxBarplot,list-method Man page
demuxBarplot.basecallQC Man page
demuxBoxplot Man page
demuxBoxplot,baseCallQC-method Man page
demuxBoxplot,basecallQC-method Man page
demuxBoxplot,list-method Man page
demuxBoxplot.basecallQC Man page
indexlengths Man page
indexlengths,BCL2FastQparams-method Man page
indexlengths,BCL2FastQparams-method, Man page
indexlengths.bcl2fastqparams Man page
interOpsReport Man page
makeFQTable Man page
passFilterBar Man page
passFilterBar,baseCallQC-method Man page
passFilterBar,basecallQC-method Man page
passFilterBar,list-method Man page
passFilterBar.basecallQC Man page
passFilterBoxplot Man page
passFilterBoxplot,baseCallQC-method Man page
passFilterBoxplot,basecallQC-method Man page
passFilterBoxplot,list-method Man page
passFilterBoxplot.basecallQC Man page
passFilterTilePlot Man page
passFilterTilePlot,baseCallQC-method Man page
passFilterTilePlot,basecallQC-method Man page
passFilterTilePlot,list-method Man page
passFilterTilePlot.basecallQC Man page
readlengths Man page
readlengths,BCL2FastQparams-method Man page
readlengths,BCL2FastQparams-method, Man page
readlengths.bcl2fastqparams Man page
reportBCL Man page
reportBCL,baseCallQC-method Man page
reportBCL,basecallQC-method Man page
reportBCL.basecallQC Man page
summaryConvStatsTable Man page
summaryConvStatsTable,baseCallQC-method Man page
summaryConvStatsTable,basecallQC-method Man page
summaryConvStatsTable,list-method Man page
summaryConvStatsTable.basecallQC Man page
summaryDemuxTable Man page
summaryDemuxTable,baseCallQC-method Man page
summaryDemuxTable,basecallQC-method Man page
summaryDemuxTable,list-method Man page
summaryDemuxTable.basecallQC Man page
validateBCLSheet Man page
basecallQC documentation built on May 6, 2019, 2:28 a.m.