Man pages for birta
Bayesian Inference of Regulation of Transcriptional Activity
| birta-methods | Methods for Function 'birta' in Package 'birta' |
| birta-package | Joint Bayesian Inference of miRNA and Transcription Factor... |
| birta.run | Main interface for Bayesian Inference of Regulation of... |
| EColiNetwork | Example TF-target graph from Regulon DB. |
| EColiOxygen | Example data set from E. Coli to sample TF activities. |
| genesets | TF-target and miRNA-target networks for simulated example. |
| get_potential_swaps | Calculate swap partner for TF-/miRNA-target graph. |
| limmaAnalysis | Perform a limma analysis on expression data. |
| limmaAnalysis-methods | Methods for Function 'limmaAnalysis' in Package 'birta' |
| plotConvergence | Plotting the likelihood along MCMC sampling. |
| potential_swaps | Potential swap moves for TF-target and miRNA-target networks... |
| sim | Simulated expression data for mRNAs and miRNAs. |
| TFexpr | Transcription factor expression values for the... |
