Bayesian Inference of Regulation of Transcriptional Activity

birta-methods | Methods for Function 'birta' in Package 'birta' |

birta-package | Joint Bayesian Inference of miRNA and Transcription Factor... |

birta.run | Main interface for Bayesian Inference of Regulation of... |

EColiNetwork | Example TF-target graph from Regulon DB. |

EColiOxygen | Example data set from E. Coli to sample TF activities. |

genesets | TF-target and miRNA-target networks for simulated example. |

get_potential_swaps | Calculate swap partner for TF-/miRNA-target graph. |

limmaAnalysis | Perform a limma analysis on expression data. |

limmaAnalysis-methods | Methods for Function 'limmaAnalysis' in Package 'birta' |

plotConvergence | Plotting the likelihood along MCMC sampling. |

potential_swaps | Potential swap moves for TF-target and miRNA-target networks... |

sim | Simulated expression data for mRNAs and miRNAs. |

TFexpr | Transcription factor expression values for the... |

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