sim: Simulated expression data for mRNAs and miRNAs.
In birta: Bayesian Inference of Regulation of Transcriptional Activity
Description
Usage
Format
Source
References
Description
This data set contains simulated expression values of miRNAs and mRNAs, together with the associated TF- and miRNA-target networks.
Usage
1
Format
A list containing the entries dat.mRNA (mRNA expression), dat.miRNA (miRNA expression), miRNAstates (activity states of miRNAs), TFstates (activity states of TFs, TRANSFAC), genesetsmiRNA (miRNA-target graph, targetScan), genesetsTFs (TF-taget graph).
Source
Simulation (see reference for details).
References
B. Zacher, K. Abnaof, S. Gade, E. Younesi, A. Tresch, and H. Frohlich. Joint Bayesian Inference of Condition Specific miRNA and Transcription Factor Activities from Combined Gene and microRNA Expression Data. submitted, 2012.
birta documentation built on April 28, 2020, 7:27 p.m.
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Description Usage Format Source References
Description
This data set contains simulated expression values of miRNAs and mRNAs, together with the associated TF- and miRNA-target networks.
Usage
1 |
Format
A list containing the entries dat.mRNA (mRNA expression), dat.miRNA (miRNA expression), miRNAstates (activity states of miRNAs), TFstates (activity states of TFs, TRANSFAC), genesetsmiRNA (miRNA-target graph, targetScan), genesetsTFs (TF-taget graph).
Source
Simulation (see reference for details).
References
B. Zacher, K. Abnaof, S. Gade, E. Younesi, A. Tresch, and H. Frohlich. Joint Bayesian Inference of Condition Specific miRNA and Transcription Factor Activities from Combined Gene and microRNA Expression Data. submitted, 2012.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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