EColiOxygen: Example data set from E. Coli to sample TF activities.
In birta: Bayesian Inference of Regulation of Transcriptional Activity
Description
Usage
Format
Source
References
Description
This data set gives expression values for three experiments of the E. Coli K12 strain under aerobic and three experiments under aerobic growth. It is used in the vignette to illustrate application of birta to TFs only.
Usage
1
Format
ExpressionSet
Source
The original data comes from (Covert et al., 2004) The normalized data set used here is taken from the qpgraph package by R. Castelo and A. Roverato.
References
M. W. Covert, E. M. Knight, J. L. Reed, M. J. Herrgard, and B. O. Palsson. Integrating high-throughput and computational data elucidates bacterial networks. Nature, 429(6987):9296,May 2004.
birta documentation built on April 28, 2020, 7:27 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Format Source References
Description
This data set gives expression values for three experiments of the E. Coli K12 strain under aerobic and three experiments under aerobic growth. It is used in the vignette to illustrate application of birta to TFs only.
Usage
1 |
Format
ExpressionSet
Source
The original data comes from (Covert et al., 2004) The normalized data set used here is taken from the qpgraph package by R. Castelo and A. Roverato.
References
M. W. Covert, E. M. Knight, J. L. Reed, M. J. Herrgard, and B. O. Palsson. Integrating high-throughput and computational data elucidates bacterial networks. Nature, 429(6987):9296,May 2004.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.