bgAdjust: Remove background
In charm: Analysis of DNA methylation data from CHARM microarrays
Description
Usage
Arguments
Details
Value
Author(s)
Examples
Description
Estimate and remove background signal using anti-genomic background probes
Usage
1
Arguments
dat
a TilingFeatureSet
copy
Only relevant when using disk-backed objects. If TRUE a copy will be made leaving the original object (dat) unchanged. The input object will not be preserved if copy=FALSE
Details
Background signal removal using a modified version of the RMA convolution model. The background signal level is estimated within GC-strata using anti-genomic background probes.
Value
a TilingFeatureSet
Author(s)
Martin Aryee <aryee@jhu.edu>
Examples
1
# See normalizeBetweenSamples
charm documentation built on May 6, 2019, 2:29 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Value Author(s) Examples
Description
Estimate and remove background signal using anti-genomic background probes
Usage
1 |
Arguments
dat |
a TilingFeatureSet |
copy |
Only relevant when using disk-backed objects. If TRUE a copy will be made leaving the original object (dat) unchanged. The input object will not be preserved if copy=FALSE |
Details
Background signal removal using a modified version of the RMA convolution model. The background signal level is estimated within GC-strata using anti-genomic background probes.
Value
a TilingFeatureSet
Author(s)
Martin Aryee <aryee@jhu.edu>
Examples
1 | # See normalizeBetweenSamples
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.