clusterMaker: Redefine array regions given chromosomal coordinates.
In charm: Analysis of DNA methylation data from CHARM microarrays
Description
Usage
Arguments
Details
Author(s)
See Also
Examples
Description
Redefine array regions given chromosomal coordinates.
Usage
1
clusterMaker(chr,pos,order.it=TRUE,maxGap=300)
Arguments
chr
Vector of chromosome names
pos
Vector of positions within chromosomes.
order.it
order probes if they are not already ordered.
maxGap
maximum allowable gap between probe start positions for probes to be grouped into the same region.
Details
Redefine array regions given chromosomal coordinates.
Author(s)
Martin Aryee <aryee@jhu.edu>, Peter Murakami, Rafael Irizarry
See Also
dmrFind, plotDMRs, plotRegions
Examples
1
# See qval
charm documentation built on May 6, 2019, 2:29 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Author(s) See Also Examples
Description
Redefine array regions given chromosomal coordinates.
Usage
1 | clusterMaker(chr,pos,order.it=TRUE,maxGap=300)
|
Arguments
chr |
Vector of chromosome names |
pos |
Vector of positions within chromosomes. |
order.it |
order probes if they are not already ordered. |
maxGap |
maximum allowable gap between probe start positions for probes to be grouped into the same region. |
Details
Redefine array regions given chromosomal coordinates.
Author(s)
Martin Aryee <aryee@jhu.edu>, Peter Murakami, Rafael Irizarry
See Also
dmrFind, plotDMRs, plotRegions
Examples
1 | # See qval
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.