R/RcppExports.R

In chromVAR: Chromatin Variation Across Regions

# Generated by using Rcpp::compileAttributes() -> do not edit by hand
# Generator token: 10BE3573-1514-4C36-9D1C-5A225CD40393

pwm_euclidean <- function(mat1, mat2) {
    .Call(`_chromVAR_pwm_euclidean`, mat1, mat2)
}

pwm_dist_single <- function(mat1, mat2, min_overlap) {
    .Call(`_chromVAR_pwm_dist_single`, mat1, mat2, min_overlap)
}

compute_pwm_dist <- function(pwms, min_overlap) {
    .Call(`_chromVAR_compute_pwm_dist`, pwms, min_overlap)
}

compute_pwm_dist2 <- function(pwms, pwms2, min_overlap) {
    .Call(`_chromVAR_compute_pwm_dist2`, pwms, pwms2, min_overlap)
}

row_sds <- function(X, na_rm = FALSE) {
    .Call(`_chromVAR_row_sds`, X, na_rm)
}

row_sds_perm <- function(X, na_rm = FALSE) {
    .Call(`_chromVAR_row_sds_perm`, X, na_rm)
}

ProbSampleReplace <- function(size, prob) {
    .Call(`_chromVAR_ProbSampleReplace`, size, prob)
}

bg_sample_helper <- function(bin_membership, bin_p, bin_density, niterations) {
    .Call(`_chromVAR_bg_sample_helper`, bin_membership, bin_p, bin_density, niterations)
}

euc_dist <- function(x) {
    .Call(`_chromVAR_euc_dist`, x)
}