getRegexPattern: Convert IUPAC sequence to an regular expression
In circRNAprofiler: circRNAprofiler: An R-Based Computational Framework for the Downstream Analysis of Circular RNAs
Description
Usage
Arguments
Value
Examples
View source: R/getRegexPattern.R
Description
The function getRegexPattern() converts a nucleotide sequence
with IUPAC codes to an regular expression.
Usage
1
getRegexPattern(iupacSeq, isDNA = FALSE)
Arguments
iupacSeq
A character string with IUPAC codes.
isDNA
A logical specifying whether the iupacSeq is DNA or RNA.
Deafult value is FALSE.
Value
A character string.
Examples
1
regextPattern <- getRegexPattern("CGUKMBVNN", isDNA = FALSE)
circRNAprofiler documentation built on March 6, 2021, 2 a.m.
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Description Usage Arguments Value Examples
View source: R/getRegexPattern.R
Description
The function getRegexPattern() converts a nucleotide sequence with IUPAC codes to an regular expression.
Usage
1 | getRegexPattern(iupacSeq, isDNA = FALSE)
|
Arguments
iupacSeq |
A character string with IUPAC codes. |
isDNA |
A logical specifying whether the iupacSeq is DNA or RNA. Deafult value is FALSE. |
Value
A character string.
Examples
1 | regextPattern <- getRegexPattern("CGUKMBVNN", isDNA = FALSE)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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