importOther: Import circRNAs detected by an annotation-based circRNA...
In circRNAprofiler: circRNAprofiler: An R-Based Computational Framework for the Downstream Analysis of Circular RNAs
Description
Usage
Arguments
Value
Examples
View source: R/importFilesPredictionTool.R
Description
The function importOther() is designed to read output file from a
annotation-based circRNA detection tool. The user after the detection of the
crcRNAs must format the output file, so that it has the following columns
with header: gene, strand, chrom, startUpBSE, endDownBSE and coverage.
If more columns are present they will be discared.
Usage
1
importOther(pathToFile)
Arguments
pathToFile
A character string specifying the path to the file
containing the detected circRNAs.
Value
A data frame.
Examples
1
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# Path to an example file containing circRNAs
pathToFile <- system.file("extdata", "other/circRNAs_001.txt",
package="circRNAprofiler")
# Inner function.
# Import circRNAs
importOther(pathToFile)
circRNAprofiler documentation built on March 6, 2021, 2 a.m.
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Description Usage Arguments Value Examples
View source: R/importFilesPredictionTool.R
Description
The function importOther() is designed to read output file from a annotation-based circRNA detection tool. The user after the detection of the crcRNAs must format the output file, so that it has the following columns with header: gene, strand, chrom, startUpBSE, endDownBSE and coverage. If more columns are present they will be discared.
Usage
1 | importOther(pathToFile)
|
Arguments
pathToFile |
A character string specifying the path to the file containing the detected circRNAs. |
Value
A data frame.
Examples
1 2 3 4 5 6 7 | # Path to an example file containing circRNAs
pathToFile <- system.file("extdata", "other/circRNAs_001.txt",
package="circRNAprofiler")
# Inner function.
# Import circRNAs
importOther(pathToFile)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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