importCircExplorer2: Import circRNAs detected by CircExplorer2
In circRNAprofiler: circRNAprofiler: An R-Based Computational Framework for the Downstream Analysis of Circular RNAs
Description
Usage
Arguments
Value
Examples
View source: R/importFilesPredictionTool.R
Description
The function importCircExplorer2 is specifically designed to
read and adapt the circExplorer2 v2.3.4 output file (circularRNA_full.txt).
See https://github.com/YangLab/CIRCexplorer2.git for more details.
Usage
1
importCircExplorer2(pathToFile)
Arguments
pathToFile
A character string specifying the path to the file
containing the detected circRNAs.
Value
A data frame.
Examples
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# Path to an example file containing circRNAs detected by CIRCexplorer2
pathToFile <- system.file("extdata", "circexplorer2/circRNAs_001.txt",
package="circRNAprofiler")
# Inner function.
# Import circRNAs.
importCircExplorer2(pathToFile)
circRNAprofiler documentation built on March 6, 2021, 2 a.m.
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Description Usage Arguments Value Examples
View source: R/importFilesPredictionTool.R
Description
The function importCircExplorer2 is specifically designed to read and adapt the circExplorer2 v2.3.4 output file (circularRNA_full.txt). See https://github.com/YangLab/CIRCexplorer2.git for more details.
Usage
1 | importCircExplorer2(pathToFile)
|
Arguments
pathToFile |
A character string specifying the path to the file containing the detected circRNAs. |
Value
A data frame.
Examples
1 2 3 4 5 6 7 | # Path to an example file containing circRNAs detected by CIRCexplorer2
pathToFile <- system.file("extdata", "circexplorer2/circRNAs_001.txt",
package="circRNAprofiler")
# Inner function.
# Import circRNAs.
importCircExplorer2(pathToFile)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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