Methods for function sampleSize
are defined with: the class object,
"aclinicalProteomicsData", intraclasscorr, and signifcut, in the signature.
aclinicalProteomicsData
is a class object for the mass spectrometry data sets, which
are in the same format as the raw data from the Biomarkers wizard software.
It has slots of matrices of raw mass spectrometry and phenotypic data sets, a
character variable for the classes of all the covariates in the phenotypic data
matrix, a character variable for the covariates of interest, and numeric value for
the number of peaks of interest. See also aclinicalProteomicsData-class
.
intraclasscorr
is a numeric variable for intraclass correlation,
and signifcut
is the
desired significance value for declearing a protein to be differentially expressed.
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