mergeArray: Merge Codelink Bioarrays Data

In codelink: Manipulation of Codelink microarray data

Description

Merge data in a Codelink Object corresponding to same samples. Need a vector indicating the classes and an optional vector indicating the labels of the mer- ged samples.

Usage

  mergeArray(object, class, names=NULL, method="mean",
             log.it=FALSE, merge.snr=TRUE)

Arguments

object	an object of class "Codelink".
class	a numeric vector indicating the classes.
names	an optional character vector indicating labels for each class.
method	the method used to summarize. Currently only "mean" supported.
log.it	logical; a logical indicating if log2 values should be returned.
merge.snr	logical; a logical indicating if SNR values should be merged.

Value

An object of class "Codelink".

Author(s)

Diego Diez

Examples

## Not run: 
	data(codelink.example)
	codelink.example <- bkgdCorrect(codelink.example)
	codelink.example <- normalize(codelink.example, log.it = FALSE)
	codelink.example <- mergeArray(codelink.example, class = c(1,1),
					names = "SAMPLE", log.it = TRUE)

## End(Not run)

codelink documentation built on Nov. 8, 2020, 8:19 p.m.