plotWCdistribution-StrandFreqMatrix-method: Creates median distribution boxplots across all libraries and...
In contiBAIT: Improves Early Build Genome Assemblies using Strand-Seq Data
Description
Usage
Arguments
Value
Examples
Description
Creates median distribution boxplots across all libraries and contigs
Usage
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## S4 method for signature 'StrandFreqMatrix'
plotWCdistribution(object, filterThreshold = 0.8)
Arguments
object
object of class StrandFreqMatrix (product of strandSeqFreqTable)
filterThreshold
numeric value used in assessing the threshold for homozygous strand calls. Default is 0.8.
Value
nothing, just plots.
Examples
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data("exampleStrandFreq")
plotWCdistribution(exampleStrandFreq, filterThreshold=0.8)
contiBAIT documentation built on Nov. 8, 2020, 5:49 p.m.
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Description Usage Arguments Value Examples
Description
Creates median distribution boxplots across all libraries and contigs
Usage
1 2 | ## S4 method for signature 'StrandFreqMatrix'
plotWCdistribution(object, filterThreshold = 0.8)
|
Arguments
object |
object of class StrandFreqMatrix (product of strandSeqFreqTable) |
filterThreshold |
numeric value used in assessing the threshold for homozygous strand calls. Default is 0.8. |
Value
nothing, just plots.
Examples
1 2 3 | data("exampleStrandFreq")
plotWCdistribution(exampleStrandFreq, filterThreshold=0.8)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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