genomeIntervals-methods: Extension for the genomeIntervals package

In easyRNASeq: Count summarization and normalization for RNA-Seq data

Description

type

Another way to access the content of the gff type column.

Usage

## S4 method for signature 'Genome_intervals'
type(x)

Arguments

x	An object of class Genome_intervals

Value

type

The content of the type column, usually a factor or a character vector

Author(s)

Nicolas Delhomme

See Also

• genomeIntervals object

• genomeIntervals-readGff3

Examples

# library
library(genomeIntervals)

# fetch the example data
gffFilePath <- fetchData("Dmel-mRNA-exon-r5.52.gff3.gz")
annot<-readGff3(gffFilePath,quiet=TRUE)
type(annot)

easyRNASeq documentation built on April 30, 2020, 2 a.m.