Calculates the coverage of high-throughput short-reads against a genome of reference and summarizes it per feature of interest (e.g. exon, gene, transcript). The data can be normalized as 'RPKM' or by the 'DESeq' or 'edgeR' package.
|Author||Nicolas Delhomme, Ismael Padioleau, Bastian Schiffthaler, Niklas Maehler|
|Bioconductor views||GeneExpression Genetics Preprocessing RNASeq|
|Maintainer||Nicolas Delhomme <[email protected]>|
|Package repository||View on Bioconductor|
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