Takes output of scaled (and optionally filtered) counts
and returns isoform proportions by dividing out the
total scaled count for the gene for each sample.
The operation is performed on the
then creating a new assay called
and on all of the inferential replicates, turning them
from counts into isoform proportions. Any transcripts
(rows) from single isoform genes are removed, and the
transcripts will be re-ordered by gene ID.
the name of the gene ID column in the
metadata columns for the rows of
display no messages
a SummarizedExperiment, with single-isoform transcripts removed, and transcripts now ordered by gene
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