fishpond: Fishpond: differential transcript and gene expression with inferential replicates

Fishpond contains methods for differential transcript and gene expression analysis of RNA-seq data using inferential replicates for uncertainty of abundance quantification, as generated by Gibbs sampling or bootstrap sampling.

Package details

AuthorAnqi Zhu, Avi Srivastava, Joseph Ibrahim, Rob Patro, Michael Love
Bioconductor views AlternativeSplicing BatchEffect DifferentialExpression DifferentialSplicing GeneExpression MultipleComparison Normalization RNASeq Regression Sequencing SingleCell Transcription Visualization
MaintainerMichael Love <[email protected]>
LicenseGPL-2
Version1.0.1
URL https://github.com/mikelove/fishpond
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("fishpond")

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fishpond documentation built on May 8, 2019, 2 a.m.