flowDensity: Sequential Flow Cytometry Data Gating

This package provides tools for automated sequential gating analogous to the manual gating strategy based on the density of the data.

AuthorM. Jafar Taghiyar, Mehrnoush Malek
Date of publicationNone
MaintainerMehrnoush Malek <mmalekes@bccrc.ca>
LicenseArtistic-2.0
Version1.8.0

View on Bioconductor

Functions

CellPopulation-class Man page
deGate Man page
flowDensity Man page
.flowDensity Man page
flowDensity,CellPopulation,ANY,logical,missing-method Man page
flowDensity,CellPopulation,missing,missing,logical-method Man page
flowDensity,flowFrame,ANY,logical,missing-method Man page
flowDensity-methods Man page
getflowFrame Man page
getflowFrame, CellPopulation-method Man page
getflowFrame,CellPopulation-method Man page
nmRemove Man page
notSubFrame Man page
plotDens Man page
plot, flowFrame, CellPopulation-method Man page
plot,flowFrame,CellPopulation-method Man page

Files

flowDensity/DESCRIPTION
flowDensity/NAMESPACE
flowDensity/R
flowDensity/R/AllClasses.R flowDensity/R/AllGenerics.R flowDensity/R/flowDensity_methods.R flowDensity/R/helper_functions.R flowDensity/R/openCyto_wrappers.R
flowDensity/README
flowDensity/build
flowDensity/build/vignette.rds
flowDensity/inst
flowDensity/inst/NEWS
flowDensity/inst/doc
flowDensity/inst/doc/flowDensityVignette.R
flowDensity/inst/doc/flowDensityVignette.Rnw
flowDensity/inst/doc/flowDensityVignette.pdf
flowDensity/inst/extdata
flowDensity/inst/extdata/sampleFCS_1.Rdata
flowDensity/inst/extdata/sampleFCS_2.Rdata
flowDensity/inst/extdata/sampleFCS_3.Rdata
flowDensity/inst/extdata/sampleFCS_3_FMO.Rdata
flowDensity/man
flowDensity/man/CellPopulation-class.Rd flowDensity/man/deGate.Rd flowDensity/man/flowDensity-methods.Rd flowDensity/man/flowDensity.Rd flowDensity/man/getflowFrame.Rd flowDensity/man/nmRemove.Rd flowDensity/man/notSubFrame.Rd flowDensity/man/plotDens.Rd
flowDensity/vignettes
flowDensity/vignettes/flowDensityVignette.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.